BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022B02LP1|AL427857
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig371 1875 0.0
>3x_Contig371
Length = 1168
Score = 1875 bits (944), Expect = 0.0
Identities = 956/962 (99%)
Strand = Plus / Minus
Query: 1 aggcgtgtatttagaaggggagttacgaaagggtgactgtyttaatggagattcaggatc 60
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 1038 aggcgtgtatttagaaggggagtcacgaaagggtgactgtcttaatggagattcaggatc 979
Query: 61 atcctcaactgatccaaacacttgtggtatattgatcatatcagtcttattcttcggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 atcctcaactgatccaaacacttgtggtatattgatcatatcagtcttattcttcggggt 919
Query: 121 tgctaatatgggcaacggaaggccattttctgtatcagcttcaaacactaatttcctccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tgctaatatgggcaacggaaggccattttctgtatcagcttcaaacactaatttcctccg 859
Query: 181 gacacttgacctactccctttgctaggtgaaagatcaacattcttcaagggctggatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gacacttgacctactccctttgctaggtgaaagatcaacattcttcaagggctggatacc 799
Query: 241 acttttagttcttgatttcgacggagtctggaatagctgttcttgtaacgacttcggatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 acttttagttcttgatttcgacggagtctggaatagctgttcttgtaacgacttcggatc 739
Query: 301 tatccctgtgaatcttgcatttttaaccgctgactttctaaccgatggtgatgcagtatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tatccctgtgaatcttgcatttttaaccgctgactttctaaccgatggtgatgcagtatc 679
Query: 361 atcaaacttcagcaattgtccttcggtwtccttttgcggcgaatgaggccatatgtttct 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 678 atcaaacttcagcaattgtccttcggtatccttttgcggcgaatgaggccatatgtttct 619
Query: 421 cttaaatatattcacaagtttggatacttggtctggtggaagcgggatcttctcctgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cttaaatatattcacaagtttggatacttggtctggtggaagcgggatcttctcctgaga 559
Query: 481 atatggtaggtcattgtcatacttctcagctagtttctgaaacgcaatcagtgcacatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atatggtaggtcattgtcatacttctcagctagtttctgaaacgcaatcagtgcacatat 499
Query: 541 atggcaccgagcaagttcctctgaattcttcagcatcactttcgatactgaaacgttgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atggcaccgagcaagttcctctgaattcttcagcatcactttcgatactgaaacgttgta 439
Query: 601 taatgttgctgtagtagaagccactttctttaaccgttggtcttgccagtcaacattaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taatgttgctgtagtagaagccactttctttaaccgttggtcttgccagtcaacattaga 379
Query: 661 atcatttttgacccctaataaatcggttacacacgttcgtacttgctgcgtagacatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atcatttttgacccctaataaatcggttacacacgttcgtacttgctgcgtagacatctt 319
Query: 721 aaattatttccacggattcttagcactctaaagtgactaaaataggatcatctactcact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaattatttccacggattcttagcactctaaagtgactaaaataggatcatctactcact 259
Query: 781 tgttgtattacactggcccggaaaagacatatatctcatctcatctccatggaccatttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgttgtattacactggcccggaaaagacatatatctcatctcatctccatggaccatttt 199
Query: 841 taacataatattaaaaacagtctttatgtagctttttgatctttttctgattttctcgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 taacataatattaaaaacagtctttatgtagctttttgatctttttctgattttctcgat 139
Query: 901 tttctccaatattgaaacaaaatatggtaaataatgagattggatattaatcmaaagtat 960
||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||
Sbjct: 138 tttctccaatattgaaacaaaatatggtaaataatgaaattgaatattaatcaaaagtat 79
Query: 961 ca 962
||
Sbjct: 78 ca 77
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7389
Number of Sequences: 1807
Number of extensions: 7389
Number of successful extensions: 233
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)